SeSE: Matrices and Statistics with Applications (September 14-18, 2020)

This course is organized by the Swedish e-Science Education program (SeSE).

It consists of three parts - self reading/lectures, labs/project preparation. The lectures, if possible, will be given at the Department of Information Technology, Uppsala University. The labs will be organized via Zoom.

Review material for self study (September 7-11, 2020):

In order to follow the course material, the following basic concepts and definitions from Statistics and Linear Algebra have to be reviewed.

Course materials (to be updated during the course)

Find here nformation on the project work to be done in order to pass the course with full credit

Detailed time schedule (updated)

Date Topic(s) Time
Location
Lecturer
September 14 Introduction. General description of the course 9:00-9:15
2345
MN
Computational Statistics - the statistician's point of view 9:15-11:00
2345
DvR
Regression analysis, statistical concepts 11:15-12:00
2345
DvR
Computational Statistics - the numerical analyst's point of view 13:15-14:00
2345
LE
Regression: Least Squares and QR factorization. Normal equations vs QR factorization 14:15-16:00
2345
LE
'Hands-on' session: Least Squares and Orthogonal Transformations (Lab 1)
Individual work
LE
     
September 15 Multivariate regression analysis, sample covariance matrix, higher dimensional problems 9:00-11:00
2345
DvR
Singular value decomposition 11:15-12:00
2345
MN
Singular value decomposition and how to compute it, HPC aspects, Applications 13:15-14:00
2345
MN
'Hands-on' session: SVD 14:15-16:00
Zoom-based
MN
     
September 16 Discussion of the experience from the last computer lab 9:00-9:15
2345
MN
Principal Component Analysis (PCA) 9:15-11:00
2345
LE
'Hands-on' session: PCA 11:15-12:00
Zoom-based
LE
Networks, graphs, and matrices 13:15-15:00
2345
LE
'Hands-on' session: networks, graphs, and matrices 15:15-17:00
Zoom-based
LE
     
September 17 Discussion of the experience from the last computer lab 9:00-9:15
2345
MN
Sparse matrices - storage formats. Handling sparse matrices in R and MATLAB 9:15-10:00
2345
MN
Solving least squares problems: direct and iterative methods. Effect of sparse matrices, HPC aspects 10:15-12:00
2345
MN
'Hands-on' session: sparse and large size matrices; CGLS 13:15-15:00
Zoom-based
MN
     
September 18 Discussion of the experience from the last computer lab 9:00-9:15
2344
MN
Pseudo-inverses 9:15-10:00
2344
MN
Pseudo-inverses. Applications 10:15-12:00
2344
DvR
     

Recommended books:

  1. James E. Gentle, Computational Statistics, Springer, 2009.
  2. Lars Eldén. Matrix methods in data mining and pattern recognition, 2nd ed, SIAM, Philadelphia, 2019.
  3. Lars Eldén, Linde Wittmeyer-Koch, Hans Bruun-Nielsen, Intrduction to numerical computations, Studentlitteratur, 2001. Freely available here.
More books:
  1. Peter Dalgaard, Introductory Statistics with R, Springer, 2002.
  2. W.John Braun, Duncan J. Murdoch, A First Course in Statistical Programmimg with R, Cambridge University Press, 2007.
  3. Geof H. Givens and Jennifer A. Hoeting, Computational Statistics, Wiley, 2005.
  4. Wendy L. Martinez and Angel R. Martinez, Computational Statistics Handbook with MATLAB, Chapman & Hall/CRC, 2002.

Organization issues:
Corona-virus related If the situation permits, to enable the participants to fully profit from the our intention is to give the lectures in person. The lab sessions will be organized via Zoom. We will follow the general instructions to have a sufficient distance between us while working. Also, we discourage you to attend the lectures in case you have some symptoms, that could be related to the corona virus effects.
Some instructions how to find us in Uppsala are to be found here .


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Last changed on June 24, 2020.
Mail to: Maya dot Neytcheva "at" it dot uu dot se "